papers

2025

 

Handbook of Dopamine; Chapter 31: Volition & Vigour

forthcoming

2024

A global dopaminergic learning rate enables adaptive foraging across many options

in review

2024

Conjoint specification of action in neocortex and striatum

Neuron 10.1016/j.neuron.2024.12.024

2024

Nonlinear manifolds underlie neural population activity during behaviour

in review

2024

Integrating across behaviors and timescales to understand the neural control of movement

Current Opinion in Neurobiology 85: 102843

2023

Preserved neural population dynamics across animals performing similar behaviour

Nature 623: 765-771

2023

Mesolimbic dopamine adapts the rate of learning from action

Nature 614: 294-302

2022

Hippocampal representations of foraging trajectories depend upon spatial context

Nature Neuroscience 25: 1693-1705

2022

Motor cortical output is selectively distributed across projection neuron classes

Science Advances 10.1126/sciadv.abj5167

2021

Dissociable contributions of phasic dopamine activity to reward and prediction

Cell Reports 10.1016/j.celrep.2021.109684

2020

Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings

Science 372(6539)

2021

Neuron-type specificity of dorsal raphe projections to ventral tegmental area

biorxiv 10.1101/2021.01.06.425641

2019

Basal ganglia circuits for action specification

Annual Reviews in Neuroscience 10.1146/annurev-neuro-070918-050452

2019

Learning from action: reconsidering movement signaling in midbrain dopamine neuron activity

Neuron 104(1): 63-77

2019

A repeated molecular architecture across thalamic pathways

Nature Neuroscience 10.1038/s41593-019-0483-3

2019

Reconstruction of 1,000 projection neurons reveals new cell types and long-range connectivity

Cell 179(1): 268-81

2018

Expansion of the Optogenetics Toolkit through Topological Inversion of Rhodopsins

Cell 175(4):1131-1140

2018

High-Throughput Synapse-Resolving Two-Photon Fluorescence Microendoscopy In Vivo

eLife 8:e40805

2018

The timing of action determines reward expectation signals in dopamine neurons

Nature Neuroscience 21(11):1563-1573

2018

A proposed circuit computation in basal ganglia: history dependent gain

Movement Disorders 33(5):704-16

2017

Desensitized D2 autoreceptors are resistant to trafficking

Scientific Reports 7: 4379

2017

Deconstructing behavioral neuropharmacology with cellular specificity

Science 356: eaaj2161

2016

Behavioral evidence for feedback gain control by the substantia nigra

biorxiv 10.1101/090209

2016

Efficient retrograde access to projection neurons with a designer AAV

Neuron 92(2):372–82

2016

Opponent and bidirectional control of movement velocity in the basal ganglia

Nature 533(7603):402-6

2016

The basal ganglia: from motor commands to the control of vigor

Current Opinion in neurobiology 37:158-166

2015

A minimally invasive microendoscopy system for in vivo functional imaging

Biomedical Optics Express 6(11): 4546-56

2015

Dopamine is required for the neural representation and control of movement vigor

Cell 162(6): 1418-30

2015

A specific component of the evoked potential mirrors phasic dopamine neuron activity during conditioning

Journal of Neuroscience 35(29): 10451-10459

2014

The inhibitory microcircuit of the substantia nigra provides feedback gain control

eLife 3:e02397

2014

Precise spatial coding is preserved along the longitudinal hippocampal axis

Hippocampus 24(12):1533-48

2014

Chapter 17: The Basal Ganglia

The Rat Nervous System 4th edition

2013

Mice infer probabilistic models for timing

PNAS 110(42): 17154-17159

2013

RIVETS: a 3D printable system for in vivo and in vitro electrophysiology and imaging

PLoS ONE 9(2): e89007

2013

Neural signals of extinction in the inhibitory microcircuit of the ventral midbrain

Nature Neuroscience 16(1):71-8

2010

Inputs to the dorsal striatum of the mouse conserve the parallel architecture of the forebrain

Frontiers in Neuroanatomy 4:147

2009

Stochastically gating ion channels enable patterned spike firing

PLoS Computational Biology 5(2):e1000290

topics

techniques

team

external

commentary

Whole brain neuronal reconstruction
MouseLight data release
Award
James Phillips wins BNA award for outstanding thesis
Nature Methods
Expanding the optogenetics toolkit
Faculty of 1000
Coddington & Dudman (2018)
Neuroscientists talk shop podcast
Josh Dudman (HHMI Janelia)
PNAS Front Matter
Researchers catch the mouse brain in the act of learning something new
Nature research highlights
When proteins stand on their head
HHMI News
Expanding the optogenetics toolkit
Hot Topics (Movement Disorders)
Shields et al. (2017)
Faculty of 1000
Tervo et al. (2016)
Hot Topics (Movement Disorders)
Yttri & Dudman (2016)
Eureka (Charles River)
Lights, experiment, action
HHMI News
Fast & Slow
Faculty of 1000
Panigrahi et al. (2015)
Faculty of 1000
Pan & Dudman (2015)
AAAS
Neurophysiology charges ahead
Faculty of 1000
Dudman et al. (2007)
Neuron Minireview
The back and forth of dendritic plasticity
Faculty of 1000
Nolan MF et al. (2004)

other publications

Welcome to Your Brain (review)
Journal of Clinical Investigation 118(8):2674
Making the grade with models of persistent activity
Neuron 49(5):649-51


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